Identification of Tobacco rattle virus resistant potato cultivars in Azad Jammu and Kashmir, Pakistan
Abstract
Tobacco rattle virus (TRV) poses a significant challenge to potato production, particularly in the hilly and mountainous terrains of Azad Jammu and Kashmir (AJK), Pakistan. To address this issue, the present study aimed to evaluate the resistance of ten potato cultivars, Line A, Kurado, Desiree, Bataina, Fleminco, Line B, Pomola, Ronaldo, Rodalph, and Margrata, against TRV. The study was conducted in two districts, Poonch and Sudhnoti, where the in vivo effects of TRV were assessed based on yield and quality characteristics. The research investigated the impact of TRV on plant growth and yield parameters using double antibody sandwich enzyme-linked immunosorbent assay (DAS-ELISA) and reverse transcription-polymerase chain reaction (RT-PCR) techniques, highlighting the role of soil-borne nematodes as vectors. The findings suggested that none of the tested cultivars exhibited complete resistance to TRV, though Desiree and Fleminco demonstrated moderate insensitivity. These results provided valuable insights into TRV management and emphasized the need for further research on resistant germplasm. The study concluded that TRV and its vector posed significant threats to potato production in AJK, with no tested germplasm exhibiting complete resistance. These findings may aid the potato industry in selecting cultivars that help mitigate the financial burden of tuber necrosis caused by TRV. This research represents the first comprehensive screening of potato germplasm against TRV in AJK, underscoring the severity of the virus as a hazard in hilly regions. Future studies involving broader germplasm screening are recommended to validate and strengthen these findings, ultimately facilitating the development of TRV-resistant potato varieties.
Keywords
Full Text:
PDFReferences
Adams, M.J., Heinze, C., Jackson, A.O., Kreuze, J.F., MacFarlane, S.A., Torrance, L., 2012. Genus Tobravirus. In: Andrew, M.Q.K., Elliot, L., Michael, J.A., Carstens, E.B. (Eds.), Virus Taxonomy: Classification and Nomenclature of Viruses. The Ninth Report of the International Committee on Taxonomy of Viruses. Elsevier, San Diego, CA, U.S.A., pp. 1156-1159.
Agrios, G.N., 2005. Plant diseases caused by viruses. In: Plant Pathology (Fifth Edition). Elsevier Academic Press, pp. 724-825.
Ali, M.C., Karasev, A.V., 2022. Virus diseases of potato and their control. In: Potato Production Worldwide. Academic Press, pp. 199-212.
Arif, M., Ali, M., Rehman, A., Fahim, M., 2013. Occurrence of Potato mop-top virus in Northwest of Pakistan. European Journal of Plant Pathology 137, 787-796.
Arif, M., Ali, M., Rehman, A., Fahim, M., 2014. Detection of Potato mop-top virus in soils and potato tubers using bait-plant bioassay, ELISA and RT-PCR. Journal of Virological Methods 195, 221-227.
Barker, H., Dale, M.F.B., 2006. Resistance to viruses in potato. In: Lobenstein, G., Carr, J.P. (Eds.), Natural Resistance Mechanisms of Plants to Viruses. Springer, Dordrecht, The Netherlands, pp. 341-366.
Boutsika, K., Phillips, M.S., MacFarlane, S.A., Brown, D.J.F., Holeva, R.C., Blok, V.C., 2004. Molecular diagnostics of some trichodorid nematodes and associated Tobacco rattle virus. Plant Pathology 53(1), 110-116.
Boydston, R.A., Mojtahedi, H., Crosslin, J.M., Thomas, P.E., Anderson, T., Riga, E., 2004. Evidence for the influence of weeds on corky ringspot persistence in alfalfa and Scotch spearmint rotations. American Journal of Potato Research 81, 215-225.
Brown, C., Mojtahedi, H., Santo, G., Hamm, P., Pavek, J., Corsini, D., Love, S., Crosslin, J., Thomas, P., 2000. Potato germplasm resistant to corky ringspot disease. American Journal of Potato Research 77, 23-27.
Brown, C.R., Crosslin, J., Mojtahedi, H., James, S., Charlton, B., 2007. Stability and nature of resistance to corky ringspot disease in an advanced tetraploid breeding population potato. American Journal of Potato Research 84, 79.
Brown, C.R., Mojtahedi, H., Crosslin, J.M., James, S., Charlton, B., Novy, R.G., Love, S.L., Vales, M.I., Hamm, P., 2009. Characterization of resistance to corky ringspot disease in potato: a case for resistance to infection by Tobacco rattle virus. American journal of potato research 86, 49-55.
Camire, M.E., Kubow, S., Donnelly, D.J., 2009. Potatoes and human health. Critical Reviews in Food Science and Nutrition 49, 823-840.
Charlton, B.A., 2006. Effects of oxamyl on suppression of the Tobacco rattle virus vector Paratrichodorus allius and corky ringspot disease of potato in the Klamath Basin of south-central Oregon. MS Agronomy Thesis, Oregon State University.
Charlton, B.A., Ingham, R.E., David, N.L., Wade, N.M., Mckinle, N., 2010. Effects of in-furrow and water-run oxamyl on Paratrichodorus allius and corky ringspot disease of potato in the Klamath Basin. Journal of Nematology 42(1), 1-7.
Clark, M.F., Adams, A.N., 1977. Characteristics of the microplate method of enzyme-linked immunosorbent assay for detection of plant viruses. Journal of General Virology 34(3), 475-483.
Crosslin, J.M., Thomas, P.E., Brown, C.R., 1999. Distribution of Tobacco rattle virus in tubers of resistant and susceptible potatoes and systemic movement of virus into daughter plants. American Journal of Potato Research 76, 191-197.
Dale, M.F.B., Robinson, D.J., Griffiths, D.W., Todd, D., Bain, H., 2000. Effects of tuberborne M-type strain of Tobacco rattle virus on yield and quality attributes of potato tubers of the cultivar Wilja. European Journal of Plant Pathology 106, 275-282.
Dale, M.F.B., Robinson, D.J., Todd, D., 2004. Effects of systemic infections with Tobacco rattle virus on agronomic and quality traits of a range of potato cultivars. Plant Pathology 53(6), 788-793.
Decraemer, W., Baujard, P.A., 1998. Polytomous key for the identification of species of the family Trichodoridae Thorne, 1935 (Nematoda: Triplonchida). Fundamental and Applied Nematology 21(1), 37-62.
Duarte, I.M., Belchior, A., Almeida, M.T.M., 2011. Potato production impacts of the association trichodorids and TRV in naturally infected fields. Commission International du Genie Rural (CIGR).
Ghazala, W., Varrelmann, M., 2007. Tobacco rattle virus 29K movement protein is the elicitor of extreme and hypersensitive-like resistance in two cultivars of Solanum tuberosum. Molecular Plant-Microbe Interactions 20(11), 1396-1405.
Gieck, S., David, N., Hamm, P., 2007. Delayed emergence, stem distortion, stunting, and foliar symptoms associated with Tobacco rattle virus and Paratrichodorus allius in potatoes grown in the Pacific Northwest. Plant Health Progress 10, 1094.
Halterman, D., Charkowski, A., Verchot, J., 2012. Potato, viruses, and seed certification in the USA to provide healthy propagated tubers. Pest Technology 6, 1-14.
Hamed, A.H., Hashim, O.M., Banna, M.E., Ghanem, G.A.M., Elnagaar, H., Shafie, M.S., 2012. Isolation and identification of Tobacco rattle virus affecting onion (Allium cepa L.) plants in Egypt. International Journal of Virology 8(1), 39-49.
Haneef, N., Arif, M., Khan, M.T., 2021. Detection of major soil-borne viruses and assessment of virus-vector association in potato-growing areas of north-western Pakistan (Khyber Pakhtunkhwa) and Azad Jammu and Kashmir. International Journal of Phytopathology 10(2), 141-154.
Harrison, B.D., 1968. Reactions of some old and new British potato cultivars to Tobacco rattle virus. European potato journal 11(3), 165-176.
He, Z., Chen, C., 2016. Peony (Paeonia lactiflora Pall.) in China. Plant Disease 100, 2543 p.
Ingham, R.E., Hamm, P.B., Baune, M., Merrifield, K.J., 2007. Control of Paratrichodorus allius and corky ringspot disease in potato with shank-injected metam sodium. Journal of Nematology 39(3), 258-262.
Ingham, R.E., Hamm, P.B., Williams, R.E., Swanson, W.H., 2000. Control of Paratrichodorus allius and corky ringspot disease of potato in the Columbia Basin of Oregon. Journal of Nematology 32(4), 566-575.
Jeffries, C., Barker, H., Khurana, S.M.P., 2005. Potato viruses (and viroids) and their management. In: Gopal, J., Khurana, S.M.P. (Eds.), Handbook of Potato Production, Improvement and Post-harvest Management. The Howorth’s Food Products Press, New York, pp. 387-422.
Jeffries, C.J., 1998. Potato. Food and Agriculture Organization of the United Nations. International Plant Genetic Resources Institute (FAO-IPGRI) Technical Guidelines for the Safe Movement of Germplasm, No. 19. FAO, Rome, Italy.
Katoch, M., Abdin, M.Z., Zadi, A.A., 2004. First report of Tobacco rattle virus occurring in gladiolus in India. Plant Pathology 53(2), 236.
King, A.M.Q., Lefkowitz, E., Adams, M.J., Carstens, E.B., 2012. Virus taxonomy ninth report of the International Committee on Taxonomy of Viruses. Elsevier/Academic Press.
Koenig, R., Hilbrich, I., Lindner, K., 2016. Molecular characterization of a new Tobacco rattle virus (TRV) RNA2 and identification of different TRV RNA1/RNA2 pairings in various potato-growing areas in Germany. Archives of Virology 161, 693-697.
Kreuze, J., Dias, J.S., Jeevalatha, A., Figueira, A., Valkonen, J., Jones, R., 2020. Viral diseases in potato. In: The Potato Crop, pp. 389-430.
MacFarlane, S.A., 2010. Tobraviruses: plant pathogens and tools for biotechnology. Molecular Plant Pathology 11(4), 577-583.
Mojtahedi, H., Crosslin, J.M., Santo, G.S., Brown, C.R., Thomas, P.E., 2001. Pathogenicity of Washington and Oregon isolates of Tobacco rattle virus on potato. American Journal of Potato Research 78, 183-190.
Mojtahedi, H., Santo, G.S., Thomas, P.E., Crosslin, J.M., Boydston, R.A., 2002. Eliminating Tobacco rattle virus from viruliferous Paratrichodorus allius and establishing a new virus-vector combination. Journal of Nematology 34(1), 66-69.
Nicolaisen, M., Bosze, Z., Nielsen, S., 1999. Detection of Tobacco rattle virus in potato tubers using a simple RT-PCR procedure. Potato Research 42, 173-179.
Okonya, J.S., Gamarra, H., Nduwayezu, A., Bararyenya, A., Kroschel, J., Kreuze, J., 2021. Serological survey and metagenomic discovery of potato viruses in Rwanda and Burundi reveals absence of PVY in Burundi and first report of TRV in potatoes in sub-Saharan Africa. Virus Research 302, 198487.
Robinson, D. J., 1992. Detection of Tobacco rattle virus by reverse transcription and polymerase chain reaction. Journal of Virological Methods 40, 57-66.
Robinson, D. J., Dale, M. F. B., Todd, D., 2004. Factors affecting the development of disease symptoms in potatoes infected by Tobacco rattle virus. European Journal of Plant Pathology 110, 921-928.
Robinson, D.J., 2003. Tobacco rattle virus. Descriptions of Plant Viruses. Scottish Crop Research Institute, Invergowrie, Dundee, DD2 5DA, UK. Revised version of DPV No. 346.
Sahi, G., Hedley, P.E., Morris, J., Loake, G.J., MacFarlane, S.A., 2016. Molecular and biochemical examination of spraing disease in potato tuber in response to Tobacco rattle virus infection. Molecular Plant Pathology 29(10), 822-828.
Steel, R.G.D., Torrie, J.H., 1980. Principles and Procedures of Statistics. 2nd Ed. McGraw-Hill Co., New York.
Whitehead, A.G., Hemming, J.R., 1965. A comparison of some quantitative methods of extracting small vermiform nematodes from soil. Annals of Applied Biology 55(1), 25-38.
Whitehead, A.G., Hooper, D.J., 2008. Needle nematodes (Longidorus spp.) and stubby-root nematodes (Trichodorus spp.) harmful to sugar beet and other field crops in England. Annals of Applied Biology 65(3), 339-350.
Xenophontos, S., Robinson, D.J., Dale, M.F.B., Brown, D.J.F., 1998. Evidence for persistent, symptomless infection of some potato cultivars with Tobacco rattle virus. Potato Research 41, 255-265.
Xu, H., Nie, J., 2006. Molecular detection and identification of potato isolates of Tobacco rattle virus. Canadian Journal of Plant Pathology 28(2), 271-279.
Yellareddygari, S.K.R., Brown, C.R., Whitworth, J.L., Quick, R.A., Hamlin, L.L., Gudmestad, N.C., 2018. Assessing potato cultivar sensitivity to tuber necrosis caused by Tobacco rattle virus. Plant Disease 102(7), 1376-1385.
DOI: https://doi.org/10.33804/pp.009.02.5627
Refbacks
- There are currently no refbacks.